Package: CEGO 2.4.3

CEGO: Combinatorial Efficient Global Optimization

Model building, surrogate model based optimization and Efficient Global Optimization in combinatorial or mixed search spaces.

Authors:Martin Zaefferer <[email protected]>

CEGO_2.4.3.tar.gz
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CEGO.pdf |CEGO.html✨
CEGO/json (API)
NEWS

# Install 'CEGO' in R:
install.packages('CEGO', repos = c('https://martinzaefferer.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

3.04 score 1 stars 73 scripts 266 downloads 3 mentions 102 exports 14 dependencies

Last updated 9 months agofrom:bfd8a5bc26. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 24 2024
R-4.5-win-x86_64OKOct 24 2024
R-4.5-linux-x86_64OKOct 24 2024
R-4.4-win-x86_64OKOct 24 2024
R-4.4-mac-x86_64OKOct 24 2024
R-4.4-mac-aarch64OKOct 24 2024
R-4.3-win-x86_64OKOct 24 2024
R-4.3-mac-x86_64OKOct 24 2024
R-4.3-mac-aarch64OKOct 24 2024

Exports:benchmarkGeneratorFSPbenchmarkGeneratorMaxCutbenchmarkGeneratorNKLbenchmarkGeneratorQAPbenchmarkGeneratorTSPbenchmarkGeneratorWTbuildModelcombinatorialLMcombinatorialRBFNcorrectionCNSDcorrectionDefinitecorrectionDistanceMatrixcorrectionKernelMatrixcreateSimulatedTestFunctiondesignMaxMinDistdesignRandomdistanceMatrixdistanceMatrixUpdatedistanceMatrixWrapperdistanceNumericHammingdistanceNumericLCStrdistanceNumericLevenshteindistancePermutationAdjacencydistancePermutationChebyshevdistancePermutationCosdistancePermutationEuclideandistancePermutationHammingdistancePermutationInsertdistancePermutationInterchangedistancePermutationLCStrdistancePermutationLeedistancePermutationLevenshteindistancePermutationLexdistancePermutationManhattandistancePermutationPositiondistancePermutationPosition2distancePermutationRdistancePermutationSwapdistancePermutationSwapInvdistanceRealEuclideandistanceSequenceLevenshteindistanceStringHammingdistanceStringLCStrdistanceStringLevenshteindistanceVectorfcorrCubicfcorrGaussfcorrLinearfcorrSphereinfillExpectedImprovementis.CNSDis.NSDis.PSDkernelMatrixlandscapeGeneratorGaussianlandscapeGeneratorGaussianBuildlandscapeGeneratorGaussianEvallandscapeGeneratorMULlandscapeGeneratorUNIlexicographicPermutationOrderNumbermodelKrigingmodelKrigingClustmodelLinearmodelRBFNmutationBinaryBitFlipmutationBinaryBlockInversionmutationBinaryCyclemutationBinarySingleBitFlipmutationPermutationInsertmutationPermutationInterchangemutationPermutationReversalmutationPermutationSwapmutationSelfAdaptmutationStringRandomChangenearCNSDoptim2OptoptimCEGOoptimEAoptimInterfaceoptimMaxMinDistoptimMIESoptimRSrecombinationBinary1PointrecombinationBinary2PointrecombinationBinaryAndrecombinationBinaryUniformrecombinationPermutationAlternatingPositionrecombinationPermutationCycleCrossoverrecombinationPermutationOrderCrossover1recombinationPermutationPositionBasedrecombinationSelfAdaptrecombinationStringSinglePointCrossoverremoveDuplicatesremoveDuplicatesOffspringrepairConditionsCorrelationMatrixrepairConditionsDistanceMatrixselfAdaptsolutionFunctionGeneratorBinarysolutionFunctionGeneratorPermutationsolutionFunctionGeneratorStringtestFunctionGeneratorSimtournamentSelection

Dependencies:anticlustbackportsBBmisccheckmatedata.tableDEoptimfastmatchlatticelpSolveMASSMatrixParamHelpersquadprogRANN

Readme and manuals

Help Manual

Help pageTopics
Combinatorial Efficient Global Optimization in RCEGO-package CEGO
Create Flow shop Scheduling Problem (FSP) BenchmarkbenchmarkGeneratorFSP
MaxCut Benchmark CreationbenchmarkGeneratorMaxCut
NK-Landscape Benchmark CreationbenchmarkGeneratorNKL
Create Quadratic Assignment Problem (QAP) BenchmarkbenchmarkGeneratorQAP
Create (Asymmetric) Travelling Salesperson Problem (TSP) BenchmarkbenchmarkGeneratorTSP
Create single-machine total Weighted Tardiness (WT) Problem BenchmarkbenchmarkGeneratorWT
Correcting Conditional Negative Semi-DefinitenesscorrectionCNSD
Correcting Definiteness of a MatrixcorrectionDefinite
Correction of a Distance MatrixcorrectionDistanceMatrix
Correction of a Kernel (Correlation) MatrixcorrectionKernelMatrix
Simulation-based Test Function Generator, Object InterfacecreateSimulatedTestFunction
Calculate Distance MatrixdistanceMatrix
Hamming Distance for VectorsdistanceNumericHamming
Longest Common Substring for Numeric VectorsdistanceNumericLCStr
Levenshtein Distance for Numeric VectorsdistanceNumericLevenshtein
Adjacency Distance for PermutationsdistancePermutationAdjacency
Chebyshev Distance for PermutationsdistancePermutationChebyshev
Cosine Distance for PermutationsdistancePermutationCos
Euclidean Distance for PermutationsdistancePermutationEuclidean
Hamming Distance for PermutationsdistancePermutationHamming
Insert Distance for PermutationsdistancePermutationInsert
Interchange Distance for PermutationsdistancePermutationInterchange
Longest Common Substring Distance for PermutationsdistancePermutationLCStr
Lee Distance for PermutationsdistancePermutationLee
Levenshtein Distance for PermutationsdistancePermutationLevenshtein
Lexicographic permutation distancedistancePermutationLex
Manhattan Distance for PermutationsdistancePermutationManhattan
Position Distance for PermutationsdistancePermutationPosition
Squared Position Distance for PermutationsdistancePermutationPosition2
R-Distance for PermutationsdistancePermutationR
Swap-Distance for PermutationsdistancePermutationSwap
Inverse-Swap-Distance for PermutationsdistancePermutationSwapInv
Euclidean DistancedistanceRealEuclidean
Levenshtein Distance forsSequences of numbersdistanceSequenceLevenshtein
Hamming Distance for StringsdistanceStringHamming
Longest Common Substring distancedistanceStringLCStr
Levenshtein Distance for StringsdistanceStringLevenshtein
Calculate Distance VectordistanceVector
Negative Logarithm of Expected ImprovementinfillExpectedImprovement
Check for Conditional Negative Semi-Definitenessis.CNSD
Check for Negative Semi-Definitenessis.NSD
Check for Positive Semi-Definitenessis.PSD
Calculate Kernel MatrixkernelMatrix
Create Gaussian LandscapelandscapeGeneratorGaussian
Multimodal Fitness LandscapelandscapeGeneratorMUL
Unimodal Fitness LandscapelandscapeGeneratorUNI
Lexicographic order numberlexicographicPermutationOrderNumber
Kriging ModelmodelKriging
Build clustered modelmodelKrigingClust
Distance based Linear ModelmodelLinear
RBFN ModelmodelRBFN
Bit-flip Mutation for Bit-stringsmutationBinaryBitFlip
Block Inversion Mutation for Bit-stringsmutationBinaryBlockInversion
Cycle Mutation for Bit-stringsmutationBinaryCycle
Single Bit-flip Mutation for Bit-stringsmutationBinarySingleBitFlip
Insert Mutation for PermutationsmutationPermutationInsert
Interchange Mutation for PermutationsmutationPermutationInterchange
Reversal Mutation for PermutationsmutationPermutationReversal
Swap Mutation for PermutationsmutationPermutationSwap
Self-adaptive mutation operatormutationSelfAdapt
Mutation for StringsmutationStringRandomChange
Nearest CNSD matrixnearCNSD
Two-Optoptim2Opt
Combinatorial Efficient Global OptimizationoptimCEGO
Evolutionary Algorithm for Combinatorial OptimizationoptimEA
Optimization Interface (continuous, bounded)optimInterface
Max-Min-Distance OptimizeroptimMaxMinDist
Mixed Integer Evolution Strategy (MIES)optimMIES
Combinatorial Random SearchoptimRS
Kriging Predictionpredict.modelKriging
Clustered Kriging Predictionpredict.modelKrigingClust
Predict: Combinatorial Krigingpredict.modelLinear
Predict: Combinatorial RBFNpredict.modelRBFN
Single Point Crossover for Bit StringsrecombinationBinary1Point
Two Point Crossover for Bit StringsrecombinationBinary2Point
Arithmetic (AND) Crossover for Bit StringsrecombinationBinaryAnd
Uniform Crossover for Bit StringsrecombinationBinaryUniform
Alternating Position Crossover (AP) for PermutationsrecombinationPermutationAlternatingPosition
Cycle Crossover (CX) for PermutationsrecombinationPermutationCycleCrossover
Order Crossover 1 (OX1) for PermutationsrecombinationPermutationOrderCrossover1
Position Based Crossover (POS) for PermutationsrecombinationPermutationPositionBased
Self-adaptive recombination operatorrecombinationSelfAdapt
Single Point Crossover for StringsrecombinationStringSinglePointCrossover
Repair Conditions of a Correlation MatrixrepairConditionsCorrelationMatrix
Repair Conditions of a Distance MatrixrepairConditionsDistanceMatrix
Kriging Simulationsimulate.modelKriging
Binary String Generator FunctionsolutionFunctionGeneratorBinary
Permutation Generator FunctionsolutionFunctionGeneratorPermutation
String Generator FunctionsolutionFunctionGeneratorString
Simulation-based Test Function Generator, Data InterfacetestFunctionGeneratorSim